Computational methods in bioinformatics (2017-2018)

Lectures (Preliminary)

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Date (and time)Topic
Monday 30 October Introduction
Wednesday 1 November Pairwise sequence alignment
Monday 6 November Protein conformation; Protein domains
Wednesday 8 November Macromolecular structure determination by X-ray crystallography
Monday 13 November (08:00) Macromolecular structure determination by NMR spectroscopy
Monday 13 November (13:15) Alexander Schliep
Identification of Copy Number Variants using Hidden Markov Models (local access)
Wednesday 15 November Molecular mechanics;
Monte Carlo algorithms;
Comparative modelling;
Side chain modelling
Monday 20 November Fold recognition;
De novo protein modelling;
Lattice models
Monday 27 November Protein design;
Surface representation
Wednesday 29 November Docking;
Channels
Monday 4 December (08:00) Multi-resolution modelling
Structural alignment
Monday 4 December (13:15) Guest lecture: Per-Georg Nyholm (Biognos AB)
Monday 11 December Presentations on individual topics
Wednesday 13 December Presentations on individual topics

Last Modified: 3 December 2017 by Graham Kemp