format version = 1.0 begin problem ss_clock1 type = SSystem date = 26-Aug-08 14:36:28 url = www.odeidentification.org // An S-system has the generic ODE: // d/dt X_i = alpha_i * (PRODUCT_j (X_j)^g_ij) - // beta_i * (PRODUCT_j (X_j)^h_ij) // where: alpha is a vector of length n // beta is a vector of length n // g is an n*n matrix // h is an n*n matrix // n is the number of variables // VARIABLES variable_1 has name = x1 is dependent variable_2 has name = x2 is dependent variable_3 has name = x3 is dependent variable_4 has name = x4 is dependent variable_5 has name = x5 is dependent variable_6 has name = x6 is dependent variable_7 has name = x7 is dependent // MODEL SPACE alpha has defaultLowerBound = 0. alpha has defaultUpperBound = 15. beta has defaultLowerBound = 0. beta has defaultUpperBound = 15. g has defaultLowerBound = -3. g has defaultUpperBound = 3. h has defaultLowerBound = -3. h has defaultUpperBound = 3. // ERROR FUNCTION errorFunction has type = minusLogLikelihoodPlusLambdaK has equation = -L+lambda*K has lambda = 5 // EXPERIMENTS experiment_1 has name = exp1 // EXPERIMENT 1 sample_1 of experiment_1 has time = 0.0 has variable_ = 16.9115 262.0955 88.8205 78.938 343.7545 25.4235 149.692 has sdev of variable_ = 1.7549 27.1978 9.217 8.1915 35.6717 2.6382 15.5336 sample_2 of experiment_1 has time = 4.0 has variable_ = 32.811 305.184 110.377 63.102 393.97 7.943 115.714 has sdev of variable_ = 3.4048 31.6692 11.4539 6.5481 40.8826 0.82425 12.0077 sample_3 of experiment_1 has time = 8.0 has variable_ = 0 278.09 55.748 6.165 234.962 4.02 103.587 has sdev of variable_ = 0.10377 28.8576 5.785 0.63975 24.3822 0.41716 10.7493 sample_4 of experiment_1 has time = 12.0 has variable_ = 0 221.57 111.22 41.141 178.76 4.042 172.446 has sdev of variable_ = 0.10377 22.9925 11.5414 4.2692 18.5501 0.41944 17.8948 sample_5 of experiment_1 has time = 16.0 has variable_ = 46.056 155.354 215.467 126.667 153.834 2.436 107.864 has sdev of variable_ = 4.7793 16.1212 22.3592 13.1443 15.9635 0.25279 11.1931 sample_6 of experiment_1 has time = 20.0 has variable_ = 35.192 254.427 191.936 227.605 339.028 18.671 129.239 has sdev of variable_ = 3.6519 26.4021 19.9173 23.6187 35.1812 1.9375 13.4112 sample_7 of experiment_1 has time = 24.0 has variable_ = 35.12 340.985 45.362 107.277 364.537 2.164 139.121 has sdev of variable_ = 3.6444 35.3843 4.7072 11.1322 37.8283 0.22456 14.4367 sample_8 of experiment_1 has time = 28.0 has variable_ = 26.29 247.459 118.495 35.419 312.217 15.627 220.745 has sdev of variable_ = 2.7281 25.679 12.2963 3.6755 32.399 1.6216 22.9069 sample_9 of experiment_1 has time = 32.0 has variable_ = 0 241.252 17.76 0 141.719 5.424 110.109 has sdev of variable_ = 0.10377 25.0349 1.843 0.10377 14.7063 0.56285 11.4261 sample_10 of experiment_1 has time = 36.0 has variable_ = 2.01 173.311 76.651 57.475 169.467 0 110.095 has sdev of variable_ = 0.20858 17.9846 7.9541 5.9642 17.5857 0.10377 11.4246 sample_11 of experiment_1 has time = 40.0 has variable_ = 58.611 192.303 246.253 148.263 195.656 3.945 112.649 has sdev of variable_ = 6.0821 19.9554 25.5539 15.3854 20.3034 0.40938 11.6897 sample_12 of experiment_1 has time = 44.0 has variable_ = 26.461 282.351 52.466 188.471 281.922 0 109.111 has sdev of variable_ = 2.7459 29.2998 5.4444 19.5578 29.2553 0.10377 11.3225 // INITIAL BOUNDS variable_1 of experiment_1 has lowerInitialBound = 13.4017 has upperInitialBound = 20.4213 variable_2 of experiment_1 has lowerInitialBound = 207.6998 has upperInitialBound = 316.4912 variable_3 of experiment_1 has lowerInitialBound = 70.3866 has upperInitialBound = 107.2544 variable_4 of experiment_1 has lowerInitialBound = 62.5551 has upperInitialBound = 95.3209 variable_5 of experiment_1 has lowerInitialBound = 272.4112 has upperInitialBound = 415.0978 variable_6 of experiment_1 has lowerInitialBound = 20.1471 has upperInitialBound = 30.6999 variable_7 of experiment_1 has lowerInitialBound = 118.6247 has upperInitialBound = 180.7593 // INITIAL SOLUTION alpha has defaultInitialValue = 1 beta has defaultInitialValue = 1 g has defaultInitialValue = 0 h has defaultInitialValue = 0 end problem ss_clock1